Alterations in DNA sequence and RNA transcription of the Bam HI-H fragment accompany attenuation of oncogenic Marek's disease herpesvirus

Virus Genes. 1993 Feb;7(1):33-51. doi: 10.1007/BF01702347.

Abstract

The nucleotide sequences of the BamHI-H fragment of the HPRS16 strain of Marek's disease virus (MDV) and of its attenuated derivative HPRS16/att have been determined. The results show that in addition to the tandem expansion of a 132 bp sequence from two copies in HPRS16 virus to eight copies in HPRS16/att, nucleotide substitutions, deletions, and insertions were also noted. Several potential open reading frames (ORFs) were identified. One of these (ORF 13) encoded a deduced protein, mol wt 32 kD, which is likely to be the serotype-1 specific phosphoprotein expressed in tumours (1) and mapped to an EcoRI fragment within BamHI-H (2). Our results suggest that this ORF is unlikely to be the B antigen (3). ORF 4, which had some similarity to CD4 and immunoglobulin M heavy chain, was encoded by a transcript that originated within the first copy of the 132 bp repeat. ORF 21, which mapped entirely within UL, encoded a deduced protein at least 322 amino acids long that had some similarity to varicella zoster virus (VZV) alpha trans-inducing protein. None of these ORFs was altered significantly by attenuation, except ORF 4 and another small ORF (ORF 3), 5' of the 132 bp repeats, which would probably fail to be transcribed because of truncation of an RNA transcript.

Publication types

  • Research Support, Non-U.S. Gov't
  • Research Support, U.S. Gov't, P.H.S.

MeSH terms

  • Amino Acid Sequence
  • Animals
  • Base Sequence
  • Chromosome Mapping
  • Cloning, Molecular
  • DNA Probes
  • DNA, Viral / genetics*
  • DNA-Cytosine Methylases / genetics*
  • Herpesvirus 2, Gallid / enzymology
  • Herpesvirus 2, Gallid / genetics*
  • Herpesvirus 2, Gallid / pathogenicity
  • Molecular Sequence Data
  • Open Reading Frames
  • RNA, Viral / genetics*
  • Repetitive Sequences, Nucleic Acid
  • Sequence Homology, Amino Acid
  • Transcription, Genetic
  • Viral Proteins / genetics
  • Virulence / genetics

Substances

  • DNA Probes
  • DNA, Viral
  • RNA, Viral
  • Viral Proteins
  • DNA modification methylase BamHI
  • DNA-Cytosine Methylases